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I-TASSER results for job id S34339

  Submitted Sequence

>Dicty_110609_Anr3
MATSISLEDSITIFEKDQNSDVLMSWCFPTITEDLKSVILNRTSLLQEKISLQFSFSKFK
NSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQFNPEKYGSLAQIMS
SVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEI
ILIWSAMAMKKRIVVYSEKLSSLLKVIRALPLFVFHRQNWNILRPFVTISDLELKDLVST
GVYCAGFTDSSIKSREDLYDILVDLSSKEVSVSSQSKDQFILGSFHKDVLRFLLDSLDDE
EITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLESLETRKLPNGMSTFLFNIAN
AEGLNG

  Predicted Secondary Structure

Sequence                  20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320                 340                 360
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |       
MATSISLEDSITIFEKDQNSDVLMSWCFPTITEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQFNPEKYGSLAQIMSSVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRIVVYSEKLSSLLKVIRALPLFVFHRQNWNILRPFVTISDLELKDLVSTGVYCAGFTDSSIKSREDLYDILVDLSSKEVSVSSQSKDQFILGSFHKDVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLESLETRKLPNGMSTFLFNIANAEGLNG
PredictionCCCCHHHHHHCCSSSSCCCCCSSSSSSCCCCCHHHHHHHHHHHCCCHHHHHHHHCHHCHCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSSSSSSCCCCCSSSCCCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCSSSSCCCHHHHHHHHHHHHHHHCCCCCCCSSCCCCCCCHHHHHHHHCCCCSSSSSCCHHHHCCCCHHHSSSSCCCCCSSSCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSCHHHHCCCCCCHHHHHHHHHHHHHHCCCC
Conf.Score984134464131477527887799996435789999999887312055512332024024659999999737741134357755467765453024247999933449899999999999996478998899999999872622226889857347675011112333999999826528999999983680999899878999999999998357899633237667467379996489917987406787377416335797899808816761777750512499999999875796512578999999999999998886653406888750748887088888178889999998730579

  Top 5 Models predicted by I-TASSER

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
C-score=-2.45
 C-score=-3.41
 C-score=-5
 C-score=-4.14
 C-score=-4.23
 
Estimated accuracy of Model1: 0.43±0.14 (TM-score)    12.5±4.3Å (RMSD)    (Read more about C-score of generated models)

  Top 10 templates used by I-TASSER

RankPDB
Hit		Iden1Iden2Cov.Norm.
Z-score		Download
Align.		                   20                  40                  60                  80                 100                 120                 140                 160                 180                 200                 220                 240                 260                 280                 300                 320                 340                 360
                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |                   |      
Sec.Str
Seq		CCCCHHHHHHCCSSSSCCCCCSSSSSSCCCCCHHHHHHHHHHHCCCHHHHHHHHCHHCHCCSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSSSSSSCCCCCSSSCCCCCCCHHHCCHHHHHHHHHHCCHHHHHHHHHHHCCCSSSSCCCHHHHHHHHHHHHHHHCCCCCCCSSCCCCCCCHHHHHHHHCCCCSSSSSCCHHHHCCCCHHHSSSSCCCCCSSSCCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCSCHHHHCCCCCCHHHHHHHHHHHHHHCCCC
MATSISLEDSITIFEKDQNSDVLMSWCFPTITEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQFNPEKYGSLAQIMSSVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRIVVYSEKLSSLLKVIRALPLFVFHRQNWNILRPFVTISDLELKDLVSTGVYCAGFTDSSIKSREDLYDILVDLSSKEVSVSSQSKDQFILGSFHKDVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLESLETRKLPNGMSTFLFNIANAEGLNG
11j93A 0.11 0.16 0.88 0.59Download --TQPLLLDAV----RGKEVERPPVWLMGRYMKSYQLLCEKRDRSENVDLVVEISLQPWKVDGVILILTPLSGMNIPFDIIKGKGPVIFDPLRT--AADVEKVREFISVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGS------SKNFTKIKRLAPKVLHALLQKFATSMAKYIRYQADSGQAVQIFD----------SWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYAS-----GSGGLLERLPLTGVDVVSLDWTVDMADGRRRLGPNVA--IQGNVDPGVLFGS--KEFITNRINDTVKKAG--------KGKHILNLGHGIKVGTPEENFAHFFEIAKGLRY--
22vglA 0.11 0.07 0.33 0.49Download --------MIRFILIQNRAGKTRLAKWYMQFDDDEKKLVHAVVTVRDAKHNFKIIYRRYAGLYFC-----------------------------------ICVDVNDNNLAYLEAIHNFVEVLFHNVCELDLVFNFYKMFLAGEIR-------------------ETSQTKVLKQLLMLQS-------------------------------LE--------------------------------------------------------------------------------------------------------------------------------------------------------
32gtqA 0.12 0.17 0.98 0.59Download KKRYPVLLSNGNKIDGGEFSDGRHWVKWFSKPSYLRNVKIEFYTTEADKPKVGFAVESLKNAKWDETRFGLEDLDIFVVAVGDFNGAENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFDRASRAVRRIENIRLLRQHQFPPVRPASYEENNFYTTVYEKGAEVVRYHTLLGEEGFQKGKLYFQR-----HDGQAVTCDDFRAAADANGINLDYSQAGTPVLEANIFELTVKQTVPPVKVGLLNAFDYQGKRATEAVLLLTEATFLLEGVTEAVVPSYPYSDDDLLLLLAHDSD----AFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKDLLDNAFKALLLGVSEAELWDG
42fnaA 0.10 0.17 0.82 1.19Download TSPKDNRKDFFDREKKGLRAPITLVLGLRRTG---KSSIIKI------------GINELNLPYIYLDLRKFEERN-----------------------------YISYKDFLLELQKEINKLVKRLPSLLKAL-------------KNIQGIVIGNEIKFNRLSFANLLESFEQASKDNVIALAYAYDNLKRIKFISGSEGLLYDYLRVEDPESPLFGRAFSTVELKPFSREEAIEF------LRRGFQEADIDFKDYEVVYEKIGGIPGWLTYFGFIYLDNKNLDFAINQTLEYAKK----LILKEFENFLHGREIARKRYLNIRTLSKCGKWSDVKRALELEEGIEISDSEIYNYLTQLTKHSW
51jr3A 0.06 0.18 0.85 0.77Download VVGQEHVLTALNGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLTATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHTTDPQKLPVTILSRCLQFHLKA------------LDVEQIRHQLEHILNEEHIAHEPRALQLLARA----AEGSLRDALSLTDQAIASGDG-----------QVSTQAVSAMLGTL------------DDDQALSL---------------VEAMVEA--NGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKLPY
61lreA 0.20 0.06 0.20 0.59Download ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEEFRMEKLNQLWEKAQRLHLPPV--RLAELHADLKIQERDELKKLKL--DGLDEDGE----KEARLIRN--------LNVILAKYGLDG
71jli 0.10 0.05 0.31 0.53Download -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANCSIMIDEIIHHLKRPPNPLLDPNNLNSEDMDILMERNLRTPNLLAFVRAVKH--------LENASAIESILKNLLPCLPLATAAPTRHPIHIKDGDWNEFRRKLTFYLKTLENAQAQQ-
82nwlA 0.13 0.16 0.15 0.51Download -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ISFIKHAKDAMLTAFVTRSSSGT----LPVTMRVAKEMGISEGIYSFTLPLGATINMDG
91wmwA 0.10 0.15 0.86 0.32Download MVPAPEAIRQARLLARLDHPDPLYRLLQDYPRRGLRGLLTVYSALALEAGLEAATALELFQNWVLVH-DDIEDGS-------EERRGRPALHRLHPMPLALNAG----DAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDL------RPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTPPAAYEEGGLRLGTAFQI-------------VDDVLNLEGGEAYGKERAGDLYEGKRT-LILLRFLEEAP-------------PEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEG------LALLEAQDLPKEALDHLRGLLALVER--
101o17A 0.12 0.16 0.87 0.59Download MNI-NEILKKL--LEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMREL----AIKIDVPNAIDTAGGLGTVNVSTASAILLSNPVAKHGNRAVSGKSG-SADVLEALGYNIIVPPERAKELVNKTNFVFLFAQY---YHPAMKNVANVRKTLGIRTIFNILGP-----LTNPANAKYQLMGVFSKDHLDLLSKSAYEL--DFNKIILVYGEPGIDEVSP----IGNTFMKIVSKRGIEEVTDFGISPIPIEKLIVNSAEDSAIKIVRLGKDEHVAEFIKINT-DRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTK----LKTIVVKS--------------------
(a)All the residues are colored in black; however, those residues in template which are identical to the residue in the query sequence are highlighted in color. Coloring scheme is based on the property of amino acids, where polar are brightly coloured while non-polar residues are colored in dark shade. (more about the colors used)
(b)Rank of templates represents the top ten threading templates used by I-TASSER.
(c)Ident1 is the percentage sequence identity of the templates in the threading aligned region with the query sequence.
(d)Ident2 is the percentage sequence identity of the whole template chains with query sequence.
(e)Cov. represents the coverage of the threading alignment and is equal to the number of aligned residues divided by the length of query protein.
(f)Norm. Z-score is the normalized Z-score of the threading alignments. Alignment with a Normalized Z-score >1 mean a good alignment and vice versa.
(g)Download Align. provides the 3D structure of the aligned regions of the threading templates.
(h)The top 10 alignments reported above (in order of their ranking) are from the following threading programs:
       1: MUSTER   2: HHSEARCH   3: SP3   4: PROSPECT2   5: PPA-I   6: HHSEARCH I   7: FUGUE   8: HHSEARCH II   9: SPARKS   10: MUSTER   

  10 proteins in PDB which are structurally closest to the first I-TASSER model (identified by TM-align)

RankTM-scoreRMSDaIDENaCov.PDB
Hit
10.8991 2.06 0.12 0.971qgrA
Model1
 
20.7472 3.86 0.10 0.922bkuB
Model1
 
30.7107 3.89 0.10 0.881wa5C
Model1
 
40.6949 3.91 0.11 0.861u6gC
Model1
 
50.6568 3.41 0.07 0.781w63A
Model1
 
60.6507 4.38 0.07 0.852w3cA
Model1
 
70.6365 4.54 0.06 0.831qbkB
Model1
 
80.6300 4.05 0.09 0.801gw5B
Model1
 
90.6179 4.76 0.07 0.831ejlI
Model1
 
100.6177 5.14 0.06 0.853c2gA
Model1
 
Structural alignment using TM-align
 
MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYRPSSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLI-EGLSAEPRVASNVCWAFSS----LAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMF--SGGVQEDALMAVSTLVEVLG--GEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKK--YLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHP-DVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARPMIHELLTEGRRSKTNKAKTLARWATKELRKLKNQA 
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATSISLEDSITIFEKDQNSDVLMSW--CF--P------TI----TEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQF------NPEKYGSLAQIMSSVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVD--SSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRIVVYSEKLSSLLKVIRALPLFVFHRQNWNILRPFVT-ISDLELKDLVSTG-VY--CA-G--FT---DSSIKSREDLYDIL--V-D-LS-S------KE--VS-VS-S-Q--SKDQFILGSFHKDVLRFLLDSLDDEEITDQ-NVIKGLNLKMKELLTKLESLKETNEETGKSSITLESLETRKLPNGMSTFLFNIANAEGLNG---------------------------------------------------------------- 
 
MSTAEFAQLLENSILSPDQNIRLTSETQLKKLSNDNFLQFAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLI-GLQDHPK-VATNCSWTIINL--VEQLAEATPSP---------IYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPS-SVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASL--GKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQN-TKPENG-----TLEALDYQIKVLEAVLDAYVGIVAG-LHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYIKRTRSGQLFSQATKDTARWAREQQKRQLSL------- 
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATSISLEDSITIFE-KDQNS--DVL-MSW--CF---P--T----ITEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQ-F-NPEKYGSLAQIMSSVYKQTGDCSKLLECQLRVFNRGQF-DVGSMGKFV-DSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKK-RIVVY-SEKLSSLLKVIRALPLFVFHRQNWNILRPFVT-ISDLELKDLVSTGVY-C-AG--F-TDSSI-KS--REDLYDI-L-V--DL--SS-KE--V--SV-SS--QS-K--D-QFI-LGSFHKDVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSIT--LE-SLE-TRKLPNGMSTFLFNIA-------------------------------------------------------------------NAEGLNG 
 
MSDLETVAKFLAESVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQITANEKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYLSYSNPLLEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSISNQPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEGTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSNWKFKDLYIYLFTALAINGNITNAGVSSTNNL-LNVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEY-VVYTYAAITIEKI--LTIRESNTSPAFIF--------H-KEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSED-S--IQPLFPQLLAQFIEIVTIMA--K---NPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVEQS--ATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPDLVPVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNS-KTE----------R--YVKKLTVFFGLISNKLG-------SDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDRKIALIGVLNMVINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVEEISTFGSHFSKLVSISEKPFDPLPEIDVNNGVRLYVAEALNKYNAISGNTFLNTILPQLTQENQVKLNQLLV 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATSISLEDS-ITIFE----KDQNSDVLM--SWCF--P--T---ITEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTT----SVETQQINKEDGSITQINVPDSLKRVVAFSLVLVR-N-----QF--NPEKYGSLAQIMSSVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRIVVY-SEKLSSLLKVIRALPLFVFHRQNWNILRPFVTI-SDLELKDLVSTGVYC-A-G--FTDSSIKSRE-D-LYDIL--V--DL-SSK-EV-SVS-S--QSK----D--QF-ILGSFHKDVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLESLETR-------K--LPN-GMSTFLFNI----------------------------------------A--N--AEGLNG---------------------------------------------------------------------------- 
 
ASYHISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVGETPLTMLQSQVPNIVKALHKQMKEKSVK-TRQCCFNMLTELVNVLPGAL---------------TQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVG-D--P----------FYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLG-DNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSL-TAAMIDAVLDELPPLISES----------DMHVSQMAISFLTTLAKVY---------PSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQSQISSNPELAA 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATSIS-LEDSITIFEKD--QN-SDVLMSW--CF-------------PT-ITEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQFN--PEKYGSLAQIMS-SVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFG------EEIILIWSAMAMKKRIV-VYSE--KLSSLLKVIRALPLFVFHRQNWNILRPFVTISDLELKDLVSTGVYC-AG--FT-DSS---IKSREDLYDIL-VDL-SSK-E----V---S--VS--SQ--SKDQFILGSFHKDVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLESLETRKL-PNGMSTFLFNIANAEGLNG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- 
 
MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKT--SN-SY-LRKKAALCAVHV----IRKVP--------------ELME-MFLPATKNLLNEKNH-GVLHTSVVLLTEMCE-RSPDMLAHFRKLVPQLVRILKNLIMS--GYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM-DI--KSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEP----------------EF-KADCASGIFLAAEK--Y-APSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRSALLERMPVMEK---------- 
------------------------------------------------------------------------------------------------MATSISLEDSITIFEKDQNSDVL-MSW--C-------FPTITEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQFNPEKYGSLAQIMSSVYKQTGDCSK-LLECQLRVFNRGQFDVGSMGKFVDSS-FDVRRSYLQTSIKDIIQLFGEEI-ILIWSAMAMKKRIVVYS-EKLSSLLKVIRALPLFVFHRQNWNILRPFVTISDLELKDLVSTG-VYC--AG--FT--D-SSIKSREDLYDILVDL-SSKE--V--SVS-S--QSKDQFILGSFHKDVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITL-ESL-ETRKLP-NGMSTFLF----------------------------------------------------------------------------------------------------------------------------------------------------------NIANAEGLNG 
 
LEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNSQFTE--IFIKQQENVTLLLSLLEEFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRS------NGA----------------IQKIVAFENAFERLLDIISEEGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWF---E--V--G--WSAQKVTNLHLMLQLVRVLVSPTNPPGATSSCQKAMFQCGLLQQLCTILMATGVPADILTETINTVSEVIRGC--QVNQDYFASVNAPSPPRPAIVVLLMSMVNERQPFVLRCAVLYCFQCFLYKNQKGQGEIVSTLLPSTIDATGNSVSAGQLLCGGLFSTDSLSNWCAAVALAHALQENATQKEQLLRVQLATSIGNPPVSLLQQCTNILSQGSKI----------------Q--TRVGLLMLLCTWLS-N-CPIAVTHFLHNSANVPFLTGQIAENLGEEEQLVQGLCALLLGISIYFNDNSLESYMKEKLKQLIEKRIGKENFIEKLGFISKHELYSRASQKPQPNFPSPEYMIFDHEFTKLVKELEGVITKAIY 
-------------------------------------------MATSISLEDSIT-IF--E-------KDQNSDVLMSWC---FP---TITE-D--LKSVILNRT-S--LLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLK-RVVAFSLVLV--R----NQF-NPEKYGSLAQIMSSVYKQTGDCSK-LLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQ--L---FGEEIILIWSA-MAMKKRIV-VYS--EKLSSLLKVIRALPLFVFHRQNWNILRPFVT---------ISDLELKDL-V-STG-VYC-A-G--FTD-SS-IK-SREDL-----------------YDILV--D--LSSKEV--SV-SS-Q-SK------D-QFI-L-----------GSFHKDVLRF-LLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLESL-E--TRKLPNGMSTFLFNIANA-----------------------------------------------E--GLNG---------------------------------------- 
 
YEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDRPLNIIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALLHIDSFTENLFALAGDEEPEVRKNVCRALVLLEVRMDRLLPHHNIVEYLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDDDDDDEIDDDDTISDWNLRKCSAAALDV-----LANV----------------YRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGC--QGIPYLPELIPHLIQCLS-D--K----------KALVRSITCWTLSRYAHWVVSQPPDTYLKPLTELLKRILDSNKRVQEAACSAFATLEEEACTE-LVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQLPPLIQKWNLKDEDKDLFPLLECLSSVATALQSGFLP--YCEPVYQRCVNLVQKTLAQALNNAQPDQY---EA-PDKDFI-VALDLLSGLAEGLG------G-NIEQLVARSNILTLYQ-CQDKPEVRQ-SSFALLGDLTKACFQHVKPCIADFPILGTNLNPEFISVCNNATWAIGEISIQGIEQPYIPVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPLQQFIRPWCTSLRNIRDNEEKDSAFRGICTISVNPSGVIQDFIFFCDAVASWINPKDDLRDFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV 
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MATS-ISLEDSITIFEKD-QNSD--VLM-SW--CF-P----TI--TEDLKSVILNRTSLLQEK----------------------------------------------------------ISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSL-VL-VRNQFN-PEKYGSLAQIMSSVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRIVVYSEKLSSLLKVIRALPLFVFHRQNWNILRPFVTISDLELKDLVSTGV--YC-AG--FT--D--SSIKSRED-LYDIL-VD-LS-S------K-EVS-VS--S-Q-SKDQFILGSFHKDVLRFLLDSL-DD--EE-I---T---DQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLESLETR-KLPNGMSTFLFNIANAE-GL---------------------------------N-G----------------------------------------------------------------------------------------------------------------------------------------------------------------- 
 
SKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMA-VNSFVKDCEDPNPLIRALAVRTMG------CI-R----------------VD-KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIA-D-------------S--NPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLS-N----YNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRP-E--ILKQEIKVFF--VK-Y----------NDP-IYVKLEKLDIMI-RL---------ASQA--NIA-QVLAELKEYATEVDVD-FVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSIEPTLLDELICHIGSLASVYHKPPNAFV---- 
----M-A-----------------------------------TSISLEDSITIFEKDQNSDVLMSW--CF-PT------ITEDLKSVILNRTSLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQFNPEKYGSLAQIMSSVYKQTGD-CSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRIVVYSEKLSSLLKVIRALPLFVFHRQNWNILRPFV-TISDLELKDLVSTGVY---CAG-FTDSSIKSRED-L----YDI-LVDLSSKEVS---------------VS-SQSKDQFILGSFHKDVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITLE--SLET-RKLPNGMSTFLFNIAN-AE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GLNG 
 
GTVNW------SVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIAS----GTSEQTK--------------AVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLA--VPDLS-T-----LACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKK-GVVPQLVKLLG-ATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSK--------------ADFKTQKEAAWAITNYTS----GGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKASLNLIEKYFS---------- 
-----MATSISLEDSITIFE------KD-QNSDVL-MSW------CFPT-ITEDLKSVILNRT----SLLQEKISLQFSFSKFKNSWIYIYTTSVETQQINKEDGSITQINVPDSLKRVVAFSLVLVRNQFNPEKYGSLAQIMSSVYKQTGDCSK-LLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRIV-VYSEKLSSLLKVIRALPLFVFHRQNW-NILRPFVTISDLELKDLVSTGV--YC--AG--FTDS-SIK--SREDLYD-ILVDLSSKEV-------S--VS-S--QS-KDQF-ILGSFHK-DVLRFLLDSLDDEEITDQNVIKGLNLKMKELLTKLESLKETNEETGKSSITL-ESL-ET---RK-LPNGMSTFLF----------------------------------------------------------------NIANAEGLNG 
 
NITQAAEQAIRLWFNTPDPQRLHAKTIRTWIRQDKFAQVDQANPNCVQQILNIIYDGLKPQPVQLPISYYAQLWYNLLDILRRFTFLPIISPYIHQVVQ--FCPRENGPQDFRELICNLISLNWQKDPHKHCANQVFQIFNCIIGVKNEKLRTEFAQHLKFEKLVGTLSEYFNPQVHPGINP-AIFIIFRFI-IS-K-DTRLKDYFIWN-NN----PHDQPPPPTGLIIKLNAVIGSYRLIAGQNPETLPQNPELAHLIQVIIRTFDLLGLLLHDSDAIDGFVRSDGVGAITTVVQ-Y--P----------NNDLIRAGCKLLLQVSDAKALAKT-PL-ENILPFLLRLIEIHPDDEVIYSGTGFLSNVVA--HKQHVKDIAIRSNAIFLLHTIISKYPRLDELTDAPKRNRVCEIICNCLRTLNNFLWIPTPNGETKTAGPNEKQQVCKFIEIDILKKLSCLSCEDTPGLLELRSTILRSFILLLRTPFVPKDGVLNVIDENRKENLIGHICAAYSWVFR-----------QPNNTRTQSTKQQLVERTISLLLVLEQCGAEKEVAQYSYSIDCPLNLLNGNQVKPTF-IHNVLVVCDKILEHCPTR-ADIW-TIDRPLEGLTNHRNSDIAKAANSLLSRFPEN------------- 
---------------------------------------------------------------------------------------------------MATSISLED--S-ITIFE-K------------D--QNSDVLM-SW----------CFP-TITEDLKSVILNRT---S-LLQEKISLQFSFSKFKNSWIYIYTTSVETQQ-IN-KEDGSITQINVPDSLKRVVAFSLVLV----------------R-NQFN--PEKYGSLAQIMSSVYKQTGDCSKLLECQLRVFNRGQFDVGSMGKFVDSSFDVRRSYLQTSIKDIIQLFGEEIILIWSAMAMKKRI-VVY-SEKLSSLLKVIRALPLFVFHRQNWNILRPFV--TISDLELKDLVSTG---------V---Y--CAG--FTDSSIKSRE-----------------DL-YDI--LV-DLSS--K-----E--VS--VSSQSKDQFI-----L--GS---------FHKDVLRFLLDSLDDEEITDQNVIKGLNLK--MK-ELLTKLESLKETNEE-----------------------------TGKSSITLESLETR-KL------PN-G-MST-----------------------------FLFNIANAEGLNG 
 
(a)Residue pairs that are structurally aligned by TM-align program are highlighted in color. Coloring scheme is based on the property of amino acids, where polar are brightly coloured while non-polar residues are colored in dark shade.(more about the colors used)
(b)Ranking of proteins is based on TM-score of the structural alignment between Model1 and the PDB structures in our template library.
(c)RMSDa is the RMSD between residues that are structurally aligned by TM-align.
(d)IDENa is the percentage sequence identity in the structurally aligned region.
(e)Cov. represents the coverage of the alignment by TM-align and is equal to the number of structurally aligned residues divided by length of the model.

  Function Prediction

  Predicted EC Numbers

RankTM-scoreRMSDaIDENaCov.EC-ScorePDB
Hit		EC No.
10.5077 5.30 0.07 0.700.37503b3bA 3.4.11.2
 
20.4542 6.50 0.07 0.730.34942e1qA 1.17.1.4
 
30.4341 6.40 0.07 0.700.34903bdjA 1.17.1.4
 
40.4054 6.81 0.08 0.690.34821qbaA 3.2.1.52
 
50.4618 5.62 0.07 0.690.34301kzrA 2.5.1.21
 
(a)Ranking is based on EC-score, which is a confidence score for the Enzyme Classification (EC) Number prediction.
(b)RMSDa is the RMSD between models and the PDB structure in the structurally aligned regions by TM-align.
(c)IDENa is percentage sequence identity in the structurally aligned region.
(d)Cov. represents the coverage of the alignment and is equal to the number of structurally aligned residues divided by length of model.
(e)EC-Score is defined based on the C-score of the structure prediction and similarity of the model with known enzyme structures, as identified using both global and local structural alignment programs. The global similarity score uses TM-score, IDENa,RMSDa and Cov. of the structural alignment by TM-align, while the local match compares the structural and chemical similarity of local spatial motifs in the model with known catalytic site of enzymes. A prediction with a EC-score >1.1 signifies a prediction with high confidence (upto 3 digit numbers of EC) and vice versa (For details, see Ambrish, Kucukural and Zhang,Large scale benchmarking of protein function prediction using predicted protein structures, 2009, submitted).

  Predicted GO terms

RankTMscoreRMSDaIDENaCov.PDB
Hit		Fh-ScoreAssociated GO Terms
10.8810 2.41 0.11 0.971uklB 0.76 GO:0008565 GO:0019904 GO:0000059 GO:0006605 GO:0006610 GO:0010926 GO:0022607 GO:0034504 GO:0034621 GO:0034622 GO:0043623 GO:0051170 GO:0051641 GO:0051649 GO:0070271 GO:0005622 GO:0005623 GO:0005634 GO:0005643 GO:0005737 GO:0012505 GO:0016020 GO:0016021 GO:0031975 GO:0043229 GO:0043234 GO:0044428 GO:0046930
20.7793 3.14 0.11 0.922bptA 0.67 GO:0005515 GO:0008320 GO:0008565 GO:0000059 GO:0006612 GO:0010926 GO:0022607 GO:0034504 GO:0034621 GO:0034622 GO:0043623 GO:0051170 GO:0051292 GO:0051641 GO:0051649 GO:0070271 GO:0005622 GO:0005623 GO:0005634 GO:0005643 GO:0005737 GO:0012505 GO:0016020 GO:0016021 GO:0031975 GO:0043229 GO:0043234 GO:0044428 GO:0046930
30.7241 4.22 0.09 0.942qnaA 0.58 GO:0008139 GO:0008270 GO:0008565 GO:0019904 GO:0043169 GO:0000059 GO:0000060 GO:0006605 GO:0006607 GO:0006610 GO:0010926 GO:0022607 GO:0034504 GO:0034621 GO:0034622 GO:0043623 GO:0044419 GO:0051170 GO:0051641 GO:0051649 GO:0070271 GO:0005622 GO:0005623 GO:0005634 GO:0005643 GO:0005654 GO:0005737 GO:0005829 GO:0012505 GO:0016020 GO:0016021 GO:0031974 GO:0031975 GO:0043229 GO:0043234 GO:0044428 GO:0046930
40.6662 3.85 0.09 0.831z3hB 0.54 GO:0005049 GO:0008262 GO:0000059 GO:0000087 GO:0000278 GO:0006611 GO:0007067 GO:0008283 GO:0010926 GO:0022607 GO:0034504 GO:0034621 GO:0034622 GO:0043623 GO:0051168 GO:0051170 GO:0051301 GO:0051641 GO:0051649 GO:0070271 GO:0005622 GO:0005623 GO:0005634 GO:0005643 GO:0005737 GO:0012505 GO:0016020 GO:0016021 GO:0031975 GO:0043229 GO:0043234 GO:0044428 GO:0046930
50.6194 4.52 0.10 0.822pkgB 0.53 GO:0003823 GO:0008601 GO:0046982 GO:0009653 GO:0009987 GO:0010926 GO:0022610 GO:0040008 GO:0044237 GO:0048869 GO:0050789 GO:0050896 GO:0065007 GO:0000159 GO:0005622 GO:0005623 GO:0005625 GO:0005634 GO:0005737 GO:0005739 GO:0005829 GO:0015630 GO:0016020 GO:0043229
60.6181 5.03 0.09 0.853c2hB 0.51 GO:0005488 GO:0000003 GO:0009653 GO:0022414 GO:0032501 GO:0040008 GO:0040011 GO:0050789 GO:0065007
70.6265 3.19 0.09 0.742bptA 0.50 GO:0005515 GO:0008320 GO:0008565 GO:0000059 GO:0006612 GO:0010926 GO:0022607 GO:0034504 GO:0034621 GO:0034622 GO:0043623 GO:0051170 GO:0051292 GO:0051641 GO:0051649 GO:0070271 GO:0005622 GO:0005623 GO:0005634 GO:0005643 GO:0005737 GO:0012505 GO:0016020 GO:0016021 GO:0031975 GO:0043229 GO:0043234 GO:0044428 GO:0046930
80.6139 4.59 0.09 0.822pf4D 0.50 GO:0005515 GO:0000159 GO:0005622 GO:0005623 GO:0005737 GO:0005829
90.6306 4.11 0.09 0.802vglB 0.49 GO:0005515 GO:0008565 GO:0002376 GO:0006955 GO:0009607 GO:0009987 GO:0050789 GO:0051179 GO:0051704 GO:0065007 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005905 GO:0030119 GO:0030131 GO:0048475
100.5150 4.40 0.11 0.671upkA 0.47 GO:0004672 GO:0005515 GO:0005524 GO:0016301 GO:0030554 GO:0006468 GO:0006611 GO:0007049 GO:0016310 GO:0032147 GO:0033674 GO:0034613 GO:0034960 GO:0043085 GO:0043412 GO:0044093 GO:0051168 GO:0051347 GO:0051641 GO:0051649 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043229

Consensus Prediction of Gene Ontology terms 
Molecular Function  Biological Process Cellular Location
GO termGO-Score  GO termGO-Score GO termGO-Score
GO:00055150.503  GO:00099870.499  GO:00057370.549
GO:00228920.353  GO:00511790.446  GO:00056230.549
GO:00052150.353  GO:00109260.357  GO:00056220.549
GO:00085650.353  GO:00511690.351  GO:00432340.502
GO:00199040.133  GO:00150310.351  GO:00160200.453
GO:00083200.117  GO:00512340.351  GO:00432270.404
GO:00228910.117  GO:00066050.351  GO:00432290.404
GO:00228570.117  GO:00516490.351  GO:00432310.404
GO:00050480.058  GO:00330360.351  GO:00432260.404
GO:00422770.058  GO:00081040.351  GO:00056340.404

(a)Ranking in the first table is based on a function prediction score (Fh-score), which is calculated based on the C-score of the structure prediction and the TM-score, IDENa, RMSDa and Cov. of the structural alignment by TM-align between the predicted model and the PDB structures (For details, see Ambrish, Kucukural and Zhang,Large scale benchmarking of protein function prediction using predicted protein structures, 2009, submitted).
(b)RMSDa is the RMSD between models and the PDB structure in the structurally aligned regions by TM-align.
(c)IDENa is the percentage sequence identity in the structurally aligned region.
(d)Cov. represents the coverage of the alignment and is equal to the number of structurally aligned residues divided by length of model.
(e)A consensus prediction of GO terms is derived from the structural analogs that have an Fh-score of >=1.0. The GO-Score associated with each prediction is defined as the average weight of the GO term, where the weights are assigned based on the Fh-score of the template from which the GO term is derived. A prediction with a GO-score >0.5 signifies a prediction with high confidence and vice versa.


  Predicted Binding Site

No binding site residues were found in the predicted structure.



 Please cite following articles when you use the I-TASSER server:
1.Yang Zhang. I-TASSER server for protein 3D structure prediction. BMC Bioinformatics, 9:40 (2008).
2.Yang Zhang. Template-based modeling and free modeling by I-TASSER in CASP7. Proteins, 8: 108-117 (2007).
3.Sitao Wu, Jeffrey Skolnick, Yang Zhang. Ab initio modeling of small proteins by iterative TASSER simulations. BMC Biology, 5:17 (2007).