Yang Zhang
Research Group

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On-line services:
I-TASSER
LOMETS
MUSTER
TM-score
TM-align
CASP7
CASP8

Downloadable:
Potential
Decoys
SPICKER

LOMETS on-line

LOMETS (Local Meta-Threading-Server) is an on-line web service for protein structure prediction. It generates 3D models by collecting consensus target-to-template alignments from 9 locally-installed threading programs (FUGUE, HHsearch, PAINT, PPA-I, PPA-II, PROSPECT2, SAM-T02, SPARKS, SP3). The output of LOMETS includes (See here for an illustrative example):

  • Target-template alignments of all individual threading servers
  • Consensus threading models selected by TM-score matrix
  • Prediction of spatial C-alpha and side-chain contact and distance map
  • Full-length models built by MODELLER with consensus restraints

Cut and paste your sequence here:

Or upload the sequence from your local computer:

Email: (mandatory, where results will be sent to)

ID: (optional, your given name of the protein)

References:
S. Wu, Y. Zhang. LOMETS: A local meta-threading-server for protein structure prediction. Nucleic Acids Research 2007; 35: 3375-3382 (download the PDF file).
zhanglab@ku.edu | (785) 864-1948 | 2030 Becker Dr, Lawrence, KS 66047