Download and install SVMSEQ
You can download SVMSEQ programs at this page.
Due to the big big size of sequence database,
we split the compressed file into 16 separate
files each with about 100M.
To install SVMSEQ in your computer, you need to do following:
1. Download all the files one by one (
Please DON'T attempt to download all the files at the same time which may
result in crash of the network connections)
2. Combine 16 files into one, i.e. run following command in linux:
> cat SVMSEQ_source.tar.bz2.* > SVMSEQ_source.tar.bz2
3. Decompress the file by
> tar -jxvf SVMSEQ_source.tar.bz2
Please read
the brief readme file
with regard to how to run the SVMSEQ program.
References:
S. Wu, Y. Zhang.
A comprehensive assessment of sequence-based and template-based methods for protein contact prediction.
Bioinformatics, vol 24, 924-931 (2008).
(download the PDF file)
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