Downloadable resources

Yang Zhang
Research Group

On-line services:
I-TASSER
LOMETS
MUSTER
TM-score
TM-align
CASP7

Downloadable:
Potential
Decoys
SPICKER

Downloadable resources

I-TASSER potentials -- http://zhang.bioinformatics.ku.edu/I-TASSER/potential
General energy terms used in the I-TASSER modeling.

I-TASSER structure decoys -- http://zhang.bioinformatics.ku.edu/I-TASSER/decoys
Protein structure decoys generated by I-TASSER ab initio modeling.

SPICKER -- http://zhang.bioinformatics.ku.edu/SPICKER
Source code and executable files of the SPICKER clustering programs, which is designed to identify near-native structures from decoys by structure clustering.

TM-score -- http://zhang.bioinformatics.ku.edu/TM-score
Source code and excutable files of TM-score, which is designed for quantitative assessement of similarities between two protein structures.

TM-align -- http://zhang.bioinformatics.ku.edu/TM-align
Source code and excutable files of TM-align, a fast protein structure alignment algorithm.

zhanglab@ku.edu | (785) 864-1948 | 2030 Becker Dr, Lawrence, KS 66047